J. Anim Sci.
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J. Anim Sci. 2006. 84:2907-2913. doi:10.2527/jas.2005-663
© 2006 American Society of Animal Science

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ANIMAL GENETICS

Adipocyte fatty-acid binding protein is closely associated to the porcine FAT1 locus on chromosome 41

A. Mercadé*,2, M. Pérez-Enciso{dagger},*, L. Varona{ddagger}, E. Alves§, J. L. Noguera{dagger}, A. Sánchez* and J. M. Folch*

* Departament de Ciència Animal i dels Aliments, Facultat de Veterinària, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain; and {dagger} Institut Català de Recerca i Estudis Avançats, 08010, Barcelona, Spain; and {ddagger} Àrea de Producció Animal, Centre UdL-IRTA, 25198, Lleida, Spain; and § Departamento de Mejora Genética Animal SGIT-INIA, 28040, Madrid, Spain

2 Corresponding author: Anna.mercader{at}uab.es

We identified 22 polymorphisms in the adipocyte fatty-acid binding protein (FABP4) gene, a strong positional candidate gene for the FAT1 locus in porcine chromosome 4. The most informative polymorphism, an insertion/deletion in intron 1, together with a single nucleotide polymorphism in intron 3, was genotyped in a cross between Iberian and Landrace pigs. After performing QTL, single marker, and haplotype analyses, we showed that there were at least 2 quantitative trait genes in the FAT1 region and that the FABP4 polymorphism was tightly associated to fatness. A comparison of allelic frequencies in a panel of pig breeds suggested that the Del2634C polymorphism was under indirect selection. We also showed that FABP4 is tightly associated to fatness but not growth. Furthermore, a haplotype analysis suggests that there is genetic heterogeneity at the FAT1 locus within the Landrace breed.

Key Words: FABP4FAT1 • fatness • pig • QTL




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A. Ojeda, J. Rozas, J. M. Folch, and M. Perez-Enciso
Unexpected High Polymorphism at the FABP4 Gene Unveils a Complex History for Pig Populations
Genetics, December 1, 2006; 174(4): 2119 - 2127.
[Abstract] [Full Text] [PDF]




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